Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900656.1_cds_XP_016450657.1_45085
CDS Infomation

[gene=LOC107775442] [db_xref=GeneID:107775442] [protein=poly(A) polymerase I-like] [protein_id=XP_016450657.1] [location=join(26290..26370,26461..26560,26644..26754,27087..27184,27619..27702,28108..28241,28346..28418,28507..28552,28669..28778,28889..28996,29067..29126,29373..29434,30426..30741,31864..32064)] [gbkey=CDS]
Sequence

ATGTCAATACCTGCAGCTCAAGCTCTCGTCTTTAGAACCCGACTCAATTTTCATCGTCCC
CTCATCTTCTGCCTTCACAAGGTCCGTAAGAGCAGTTCTATTGCTGCACTAGATGTTGCA
CCGCTGGTGGATCCGGTAATAGTATTAAAGAATCGATCCCATAATACTTCAGATGTAAAA
GGTGATGAGAGTGGGCCTAAATGGAAGAAATTGAGTTCAGAAGAACTTGGAATTAGTACC
TCAATGATTGCAAAGCCTACAAGAGTGGTTCTGAATGGGCTAAAGAAAAAGGGGTTTGAG
GTCTACCTTGTTGGAGGTTGTGTTAGAGATCTTCTATTGAACAAAACTCCTAAAGATTTC
GATATAATAACGTCAGCTGAACTTAAAGAGGTACTGAAAACATTTCAGCGATGTGAAATT
GTTGGAAGGAGGTTCCCTATATGCCACGTGCATGTTGATGATACCATTGTGGAGGTTTCT
AGCTTTAACACCACTGGGAGGAGATTTAAGAGGAATTCCTATAATGTTGTTCGTAGACCT
GCCATGTGCGATGAGGCTGATTTCATTCGCTGGAAAAATTGTTTGGGAAGAGATTTTACT
ATCAATGGATTGATGTTTGATCCATTTGCAAGGATAGTCTATGACTACTTGGGTGGACTG
GAAGATATTAGAAGGGCTAAAGTGAGATGTGTGATTCCCGCAAGTGCTTCTTTCATCGAG
GACTGTGCTCGCATTTTGCGTGGAGTGAGGATAGCAGGCCGTTTAGGATTTCGTTTTTCT
AGAGAAACAGCTCATTTTGTAAAAGAATTAGCATCTTCCATATCTAAACTTGATAAGGGA
AGGATCTTAATGGAAATGAATTACATGCTGGCATATGGTTCTGCTGAAGCTTCATTGAGA
TTATTATGGAAATTTGGACTTCTAGAAATTCTTCTACCAATCCAGGCTTCTTACTTTATT
TCCCAGGGATTTCGAAGGCGTGACAAGAGATCTAATATGCTTCTGTCTTTGTTTTCAACA
TTGGACAACCTTCTGGCTCCCGACAGGCCTTGCCATTCTAGTTTATGGATTGCAATCTTA
GCATTCCATAAAGCACTGGTGGACAGACCTAGAGATCCTTTGGTTGTTGCTGCTTTTAGC
GCTGCTGTCCACTGTGGTGGATCTTTGTCAGATGTGTTAGGAGTAGCGGGAAAGATCTCT
CAACCACATGATACAAGGTTTTCTGAGCTCTTAGACTTCCGAATTGTAGAGTCAGATGAA
GCATTATTGGATGAGATGATGGATCTTGCCACTTATGTGGAAGCTGCATTACGAAAGATG
ACTGATGAGCATTTTATTTCCCAAGCTCTGACAGAGTATCCTCAAGCGCCAAAGTCGGAT
CTGGTGTTTATCCCATGGGCATTGTCACAAAAGGTTGATGCAATATTTGAGTGTGTTAGA
AGGGGAAAAGAGAAGGGATTTCGACAAAAACGAGGCAGTAAAATTGATTATGAGTCCCTA
GCATTAGGAAAATTGCATGAGATTAGACATATTTTTGCAAGGGTTGTTTTTGATACCGTG
TTTCCTCCTCATCTCAAAGACTAA

Peptide Sequence

PEP ID

XP_016450657.1
PEP Infomation

PREDICTED: poly(A) polymerase I-like [Nicotiana tabacum]
Sequence

MSIPAAQALVFRTRLNFHRPLIFCLHKVRKSSSIAALDVAPLVDPVIVLKNRSHNTSDVK
GDESGPKWKKLSSEELGISTSMIAKPTRVVLNGLKKKGFEVYLVGGCVRDLLLNKTPKDF
DIITSAELKEVLKTFQRCEIVGRRFPICHVHVDDTIVEVSSFNTTGRRFKRNSYNVVRRP
AMCDEADFIRWKNCLGRDFTINGLMFDPFARIVYDYLGGLEDIRRAKVRCVIPASASFIE
DCARILRGVRIAGRLGFRFSRETAHFVKELASSISKLDKGRILMEMNYMLAYGSAEASLR
LLWKFGLLEILLPIQASYFISQGFRRRDKRSNMLLSLFSTLDNLLAPDRPCHSSLWIAIL
AFHKALVDRPRDPLVVAAFSAAVHCGGSLSDVLGVAGKISQPHDTRFSELLDFRIVESDE
ALLDEMMDLATYVEAALRKMTDEHFISQALTEYPQAPKSDLVFIPWALSQKVDAIFECVR
RGKEKGFRQKRGSKIDYESLALGKLHEIRHIFARVVFDTVFPPHLKD

Transcript Sequence

Gene sequence data has not been registered.